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1

Gene networks associated with conditional fear in mice identified using a systems genetics approach

Christopher C Park, Greg D Gale, Simone de Jong, Anatole Ghazalpour, Brian J Bennett, Charles R Farber, Peter Langfelder, Andy Lin, Arshad H Khan, Eleazar Eskin, Steve Horvath, Aldons J Lusis, Roel A

Journal:

BMC Systems Biology

Year:

2011

Language:

english

File:

PDF, 1.52 MB

english, 2011

2

Unraveling Inflammatory Responses using Systems Genetics and Gene-Environment Interactions in Macrophages

Orozco, Luz D., Bennett, Brian J., Farber, Charles R., Ghazalpour, Anatole, Pan, Calvin, Che, Nam, Wen, Pingzi, Qi, Hong Xiu, Mutukulu, Adonisa, Siemers, Nathan, Neuhaus, Isaac, Yordanova, Roumyana, G

Journal:

Year:

2012

Language:

english

File:

PDF, 1.51 MB

english, 2012

3

Weighted gene coexpression network analysis strategies applied to mouse weight

Tova F. Fuller, Anatole Ghazalpour, Jason E. Aten, Thomas A. Drake, Aldons J. Lusis, Steve Horvath

Journal:

Mammalian Genome

Year:

2007

Language:

english

File:

PDF, 456 KB

english, 2007

4

Hepatocellular carcinoma in Txnip-deficient mice

Sheth, S S, Bodnar, J S, Ghazalpour, A, Thipphavong, C K, Tsutsumi, S, Tward, A D, Demant, P, Kodama, T, Aburatani, H, Lusis, A J

Journal:

Year:

2006

Language:

english

File:

PDF, 345 KB

english, 2006

5

An Integrative Genetics Approach to Identify Candidate Genes Regulating BMD: Combining Linkage, Gene Expression, and Association

Charles R Farber, Atila van Nas, Anatole Ghazalpour, Jason E Aten, Sudheer Doss, Brandon Sos, Eric E Schadt, Leslie Ingram-Drake, Richard C Davis, Steve Horvath, Desmond J Smith, Thomas A Drake, Aldon

Journal:

Journal of Bone and Mineral Research

Year:

2009

Language:

english

File:

PDF, 2.75 MB

english, 2009

6

948 Transcriptome Analysis and Theranostic Profiling of Ewing Sarcoma (ES) and Desmoplastic Small Round Cell Tumours (DSRCT)

W.H. Wen, A. Ghazalpour, S. Chen, B. Rhees, M.J. McGinniss, Z. Gatalica

Journal:

European Journal of Cancer

Year:

2012

Language:

english

File:

PDF, 50 KB

english, 2012

7

Genetic loci contributing to age-related hippocampal lesions in mice

Kelly L Krass, Veronica Colinayo, Anatole Ghazalpour, Harry V Vinters, Aldons J Lusis, Thomas A Drake

Journal:

Neurobiology of Disease

Year:

2003

Language:

english

File:

PDF, 200 KB

english, 2003

8

Hybrid mouse diversity panel: a panel of inbred mouse strains suitable for analysis of complex genetic traits

Anatole Ghazalpour, Christoph D. Rau, Charles R. Farber, Brian J. Bennett, Luz D. Orozco, Atila van Nas, Calvin Pan, Hooman Allayee, Simon W. Beaven, Mete Civelek, Richard C. Davis, Thomas A. Drake, R

Journal:

Mammalian Genome

Year:

2012

Language:

english

File:

PDF, 2.58 MB

english, 2012

9

Juxtaglomerular cell tumor: A morphological, immunohistochemical and genetic study of six cases

Naoto Kuroda, Sperga Maris, Federico A. Monzon, Puay Hoon Tan, Anjula Thomas, Fredrik B. Petersson, Zoran Gatalica, Anatole Ghazalpour, , Ryan P. Bender, , Petr Grossmann, Michal Michal, Marian Svajdl

Journal:

Human Pathology

Year:

2013

Language:

english

File:

PDF, 2.72 MB

english, 2013

10

Limited RNA Editing in Exons of Mouse Liver and Adipose

Lagarrigue, S., Hormozdiari, F., Martin, L. J., Lecerf, F., Hasin, Y., Rau, C., Hagopian, R., Xiao, Y., Yan, J., Drake, T. A., Ghazalpour, A., Eskin, E., Lusis, A. J.

Journal:

Year:

2013

Language:

english

File:

PDF, 2.42 MB

english, 2013

11

Genomic analysis of metabolic pathway gene expression in mice

Anatole Ghazalpour, Sudheer Doss, Sonal S Sheth, Leslie A Ingram-Drake…

Journal:

Year:

2005

Language:

english

File:

PDF, 229 KB

english, 2005

12

65O HER2 IN NON-SMALL CELL LUNG CARCINOMAS

Gatalica, Z., Gupta, P., Ghazalpour, A., Johnston, C., Voss, A., Basu, G., Bender, R.

Journal:

Year:

2013

Language:

english

File:

PDF, 153 KB

english, 2013

13

475 Differences in Gene Expression Between Androgen Receptor Positive and Negative Triple Negative (ER/PR/Her2) Breast Carcinomas

Ghazalpour, A., Basu, G., Bender, R., Gatalica, Z.

Journal:

European Journal of Cancer

Year:

2012

Language:

english

File:

PDF, 58 KB

english, 2012

14

Genetic regulation of mouse liver metabolite levels

Ghazalpour, A., Bennett, B. J., Shih, D., Che, N., Orozco, L., Pan, C., Hagopian, R., He, A., Kayne, P., Yang, W.-p., Kirchgessner, T., Lusis, A. J.

Journal:

Molecular Systems Biology

Year:

2014

Language:

english

File:

PDF, 1.24 MB

english, 2014

15

Programmed Cell Death 1 (PD-1) and Its Ligand (PD-L1) in Common Cancers and Their Correlation with Molecular Cancer Type

Gatalica, Z., Snyder, C., Maney, T., Ghazalpour, A., Holterman, D. A., Xiao, N., Overberg, P., Rose, I., Basu, G. D., Vranic, S., Lynch, H. T., Von Hoff, D. D., Hamid, O.

Journal:

Cancer Epidemiology Biomarkers & Prevention

Year:

2014

Language:

english

File:

PDF, 802 KB

english, 2014

16

A high-resolution association mapping panel for the dissection of complex traits in mice

Bennett, B. J., Farber, C. R., Orozco, L., Min Kang, H., Ghazalpour, A., Siemers, N., Neubauer, M., Neuhaus, I., Yordanova, R., Guan, B., Truong, A., Yang, W.-p., He, A., Kayne, P., Gargalovic, P., Ki

Journal:

Genome Research

Year:

2010

Language:

english

File:

PDF, 1.32 MB

english, 2010

17

Extraskeletal Myxoid Chondrosarcoma of the Vulva With PLAG1 Gene Activation

Dotlic, Snjezana, Gatalica, Zoran, Wen, Wenhsiang, Ghazalpour, Anatole, Mangham, Chas, Babic, Damir, Zekan, Josko, Vranic, Semir

Journal:

Applied Immunohistochemistry & Molecular Morphology

Year:

2014

Language:

english

File:

PDF, 382 KB

english, 2014

18

Analysis of Allele-Specific Expression in Mouse Liver by RNA-Seq: A Comparison With Cis-eQTL Identified Using Genetic Linkage

Lagarrigue, S., Martin, L., Hormozdiari, F., Roux, P.-F., Pan, C., van Nas, A., Demeure, O., Cantor, R., Ghazalpour, A., Eskin, E., Lusis, A. J.

Journal:

Year:

2013

Language:

english

File:

PDF, 1.45 MB

english, 2013

19

Copy number variation influences gene expression and metabolic traits in mice

Orozco, L. D., Cokus, S. J., Ghazalpour, A., Ingram-Drake, L., Wang, S., van Nas, A., Che, N., Araujo, J. A., Pellegrini, M., Lusis, A. J.

Journal:

Human Molecular Genetics

Year:

2009

Language:

english

File:

PDF, 532 KB

english, 2009

20

Comparative Analysis of Proteome and Transcriptome Variation in Mouse

Ghazalpour, Anatole, Bennett, Brian, Petyuk, Vladislav A., Orozco, Luz, Hagopian, Raffi, Mungrue, Imran N., Farber, Charles R., Sinsheimer, Janet, Kang, Hyun M., Furlotte, Nicholas, Park, Christopher

Journal:

Year:

2011

Language:

english

File:

PDF, 1.78 MB

english, 2011

21

Epigenome-Wide Association of Liver Methylation Patterns and Complex Metabolic Traits in Mice

Orozco, Luz D., Morselli, Marco, Rubbi, Liudmilla, Guo, Weilong, Go, James, Shi, Huwenbo, Lopez, David, Furlotte, Nicholas A., Bennett, Brian J., Farber, Charles R., Ghazalpour, Anatole, Zhang, Michae

Journal:

Cell Metabolism

Year:

2015

Language:

english

File:

PDF, 3.19 MB

english, 2015

22

Complex Inheritance of the 5-Lipoxygenase Locus Influencing Atherosclerosis in Mice

Journal:

Year:

2006

Language:

english

File:

PDF, 227 KB

english, 2006

23

Genetic locus on mouse chromosome 7 controls elevated heart rate

Smolock, E. M., Ilyushkina, I. A., Ghazalpour, A., Gerloff, J., Murashev, A. N., Lusis, A. J., Korshunov, V. A.

Journal:

Physiological Genomics

Year:

2012

Language:

english

File:

PDF, 9.17 MB

english, 2012

24

High-Resolution Mapping of Gene Expression Using Association in an Outbred Mouse Stock

Ghazalpour, Anatole, Doss, Sudheer, Kang, Hyun, Farber, Charles, Wen, Ping-Zi, Brozell, Alec, Castellanos, Ruth, Eskin, Eleazar, Smith, Desmond J., Drake, Thomas A., Lusis, Aldons J., Gibson, Greg

Journal:

Year:

2008

Language:

english

File:

PDF, 416 KB

english, 2008

25

Integrating Genetic and Network Analysis to Characterize Genes Related to Mouse Weight

Ghazalpour, Anatole, Doss, Sudheer, Zhang, Bin, Wang, Susanna, Plaisier, Christopher, Castellanos, Ruth, Brozell, Alec, Schadt, Eric E., Drake, Thomas A., Lusis, Aldons J., Horvath, Steve

Journal:

Year:

2006

Language:

english

File:

PDF, 419 KB

english, 2006

26

Mouse Genome-Wide Association and Systems Genetics Identify Asxl2 As a Regulator of Bone Mineral Density and Osteoclastogenesis

Farber, Charles R., Bennett, Brian J., Orozco, Luz, Zou, Wei, Lira, Ana, Kostem, Emrah, Kang, Hyun Min, Furlotte, Nicholas, Berberyan, Ani, Ghazalpour, Anatole, Suwanwela, Jaijam, Drake, Thomas A., Es

Journal:

Year:

2011

Language:

english

File:

PDF, 3.62 MB

english, 2011

27

The Genetic Landscape of Hematopoietic Stem Cell Frequency in Mice

Zhou, Xiaoying, Crow, Amanda L., Hartiala, Jaana, Spindler, Tassja J., Ghazalpour, Anatole, Barsky, Lora W., Bennett, Brian J., Parks, Brian W., Eskin, Eleazar, Jain, Rajan, Epstein, Jonathan A., Lusi

Journal:

Stem Cell Reports

Year:

2015

Language:

english

File:

PDF, 2.62 MB

english, 2015

28

Mutations in the Kinase Domain of the HER2/ERBB2 Gene Identified in a Wide Variety of Human Cancers

Wen, Wenhsiang, Chen, Wangjuh (Sting), Xiao, Nick, Bender, Ryan, Ghazalpour, Anatole, Tan, Zheng, Swensen, Jeffrey, Millis, Sherri Z., Basu, Gargi, Gatalica, Zoran, Press, Michael F.

Journal:

The Journal of Molecular Diagnostics

Year:

2015

Language:

english

File:

PDF, 732 KB

english, 2015

29

Thematic review series: The Pathogenesis of Atherosclerosis. Toward a biological network for atherosclerosis

Journal:

The Journal of Lipid Research

Year:

2004

Language:

english

File:

PDF, 1.02 MB

english, 2004

30

Quantitative Trait Loci Association Mapping by Imputation of Strain Origins in Multifounder Crosses

Zhou, J. J., Ghazalpour, A., Sobel, E. M., Sinsheimer, J. S., Lange, K.

Journal:

Year:

2012

Language:

english

File:

PDF, 942 KB

english, 2012

31

Expanding role of gut microbiota in lipid metabolism

Ghazalpour, Anatole, Cespedes, Ivana, Bennett, Brian J., Allayee, Hooman

Journal:

Current Opinion in Lipidology

Year:

2016

Language:

english

File:

PDF, 1.43 MB

english, 2016

32

The Genetic Architecture of Coronary Artery Disease: Current Knowledge and Future Opportunities

Hartiala, Jaana, Schwartzman, William S., Gabbay, Julian, Ghazalpour, Anatole, Bennett, Brian J., Allayee, Hooman

Journal:

Current Atherosclerosis Reports

Year:

2017

Language:

english

File:

PDF, 1.20 MB

english, 2017

33

Molecular profiling of locally advanced/metastatic olfactory neuroblastomas

Gatalica, Z., Ghazalpour, A., Swensen, J., Bender, R., Vranic, S., Feldman, R., Reddy, S.

Journal:

Annals of Oncology

Year:

2016

Language:

english

File:

PDF, 34 KB

english, 2016

34

The Systems Genetics Resource: A Web Application to Mine Global Data for Complex Disease Traits

van Nas, Atila, Pan, Calvin, Ingram-Drake, Leslie A., Ghazalpour, Anatole, Drake, Thomas A., Sobel, Eric M., Papp, Jeanette C., Lusis, Aldons J.

Journal:

Frontiers in Genetics

Year:

2013

Language:

english

File:

PDF, 1.59 MB

english, 2013

35

Multiplatform molecular profiling identifies potentially targetable biomarkers in malignant phyllodes tumors of the breast

Gatalica, Zoran, Vranic, Semir, Ghazalpour, Anatole, Xiu, Joanne, Ocal, Idris Tolgay, McGill, John, Bender, Ryan P., Discianno, Erin, Schlum, Aaron, Sanati, Souzan, Palazzo, Juan, Reddy, Sandeep, Pock

Journal:

Year:

2016

Language:

english

File:

PDF, 3.75 MB

english, 2016

36

335PBIOMARKERS OF TARGETED THERAPIES IN MALIGNANT PHYLLODES TUMORS OF THE BREAST

Gatalica, Z., Basu, G., Ghazalpour, A., Bender, R., Vranic, S., Millis, S., McGill, J., Voss, A.

Journal:

Annals of Oncology

Year:

2014

File:

PDF, 60 KB

2014

37

Oncocytoma-Like Renal Tumor With Transformation Toward High-Grade Oncocytic Carcinoma

Sirintrapun, Sahussapont J., Geisinger, Kim R., Cimic, Adela, Snow, Anthony, Hagenkord, Jill, Monzon, Federico, Legendre, Benjamin L., Ghazalpour, Anatole, Bender, Ryan P., Gatalica, Zoran

Journal:

Year:

2014

File:

PDF, 486 KB

2014